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* fix(learnings): publish what an older import --from-mr left in the checkout (#823) Item 7. import --from-mr in 0.25.0 to 0.26.0-beta.3 wrote learnings/<date>-<title>.md, with source_mr in its frontmatter, into the learnings checkout and never committed it. Nothing published it. In single-repo mode it also kept `git worktree remove` from removing the checkout an older teamai left in .teamai/, so every pull and contribute stopped on CheckoutRefusedError. publishQueuedLearnings now takes the sync lock first, and under it, before listing the queue, queues every untracked file of exactly that shape (directly under learnings/, date name, source_mr), in the active namespace and with contribute's name, then deletes the original. It finds the one checkout this repo registers for the branch (git worktree list), so the shared checkout and the old .teamai/learnings-wt are both covered and another repository's never is. A file the branch or the queue already has, by source_mr or by content, is deleted instead, and the warning names what has it. A dry run touches nothing. Item 21. The branch side of that duplicate check was the checkout's own tracked files. In single-repo mode the checkout is often the old .teamai/learnings-wt, which nothing syncs any more, so a teammate's later import of the same MR was missed and the remnant went out as a duplicate. When there are remnants, the check now also fetches origin/teamai-learnings (best effort) and reads what origin has that the checkout's commit lacks. Item 20. pull --dry-run published the queue: publishQueuedLearnings honoured dryRun only for the remnants. It now stops after listing the queue, and pull prints "[dry-run] Would publish N queued learning(s)" instead of publishing or warning. Maintenance sweep. publishLearningsMaintenance staged all of learnings/, so a confidence write-back or a prune swept any uncommitted file into its commit. confidence write-back, prune and promote now return the files they wrote or removed, and only those are staged (a removed file git never tracked is left out, since naming it would fail the add). That exposed a second bug: simple-git lists a staged rename under `renamed`, not `staged`, so a `prune --archive` with nothing else to stage counted as nothing to commit and was never published. commitAndPushAt now counts renames. #814 follow-ups. drainCheckoutQueue is gone: the preAction migration moves a checkout's queue before contribute and import --from-mr. Retire-only now says "Retired <legacy> to <backup>: this project's data already lives in <partition>"; a linked worktree lands there too, so "Finished an interrupted migration" was wrong for it. config.yaml.*.tmp, the temp an interrupted config save leaves (#831), is ignored in the single-repo and project-scope .gitignore, and the single-repo self-heal adds it. Item 15. After a failed refresh, readableReportsWorktree called ensure without the reports lock, so it could create the checkout while a writer that had just taken the lock created it too. It now refreshes once more under the lock and throws the cause if that fails as well. Item 17. init replaced the team clone before saving the new config, so an init that stopped in between (an unknown --role, a busy queue lock) left the old team's config.yaml beside the new team's clone. Just before it clones another owner's repo, init now settles the old install as the final save would (queue set aside, indexes dropped) and moves its config.yaml to config.yaml.previous. A failed init then leaves no config, and commands ask for teamai init. * fix(learnings): address review — literal pathspecs, carry settings after a failed clone Maintenance now stages exactly the files it names: commitAndPushAt and the removed-file ls-files lookup pass --literal-pathspecs, so a learning named with [ or * no longer stages the stray files it matches as a pattern. init reads the config it set aside when the rerun finds none, so an init whose replacement clone failed no longer drops enabledAgents, disabledAgents, toolRoots and inheritUserScope on the next run. * fix(learnings): address review — HTTP maintenance, agent lists on a plain rerun An HTTP install's learnings dir is no git checkout, so the removed-file ls-files lookup threw after a prune had already deleted the file. It now returns the same non-fatal failed publish commitAndPush gives. init without --agent keeps the carried enabledAgents and disabledAgents, so a rerun after a failed replacement clone no longer reactivates tools uninstall --agent excluded. * fix(learnings): address review — retry maintenance a busy lock or failed push kept local, keep remnants while origin is unreachable * fix(learnings): address review — queue remnants when origin has no learnings branch, never let one bad maintenance record or remnant block the rest * fix(learnings): address review — dedup remnants against origin's tree, keep a maintenance record a read failed on * fix(learnings): address review — commit only the published paths, not the whole index (#823) * fix(learnings): address review — keep a staged file across the push-retry rebase (#823) The path-limited commit leaves a file someone else staged in the checkout, and git refuses to rebase with anything staged, so a non-fast-forward push failed every retry. Snapshot it with git stash create around the rebase, as syncWorktree does, and re-apply it with --index so it stays staged. * fix(learnings): address review — read the queue for remnant dedup under the queue lock and ownership check; move a stale config aside when init reuses a clone (#823) * ci: re-run checks (flaky dry-run-load-path test, unrelated to this PR) * fix(learnings): address review — keep staged files staged when the snapshot restore conflicts; never publish a hand edit as a recorded maintenance run (#823) * fix(learnings): address review — resolve snapshot conflicts from the snapshot without a reset, keep a conflicting staged file unstaged, no hand-edit warning for a merged maintenance commit (#823) * fix(learnings): address review — point the unpublished-edit warning at git status (#823)