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codegraph upgrade told a global npm install from a local one by whether the running file sat under the current folder. npm's global folder is often inside the home folder (Windows %APPDATA%\npm, nvm, fnm, ~/.npm-global), so run from home every such global install was taken for a local one: npm ran without -g, the global copy stayed on the old version and a second copy landed in the home folder. The same test sent a project's own install to npm -g when upgrade ran from one of its subfolders or from outside it, and installed into the parent folder instead when it ran from one. The scope now comes from npm's layout around the outermost node_modules. A global launcher beside it (<prefix>\codegraph.cmd on Windows, <prefix>/bin/codegraph next to <prefix>/lib on POSIX) means global. A project around it (node_modules/.bin/codegraph or a package.json) means local, and npm then runs in that project, wherever upgrade was run from; the version npm left there is read back, with a warning when it did not change. A pnpm, yarn or bun install (a .pnpm layout, or that manager's lockfile beside node_modules) is named and given that manager's command, since npm run in its folder would only add a second copy. Validation: on Windows, the real CLI was run with a private USERPROFILE, HOME, APPDATA and LOCALAPPDATA (npm config get prefix = the private AppData\Roaming\npm) against installs laid out the way npm lays them out, with a fake npm first on PATH that logs its command and folder. main ran the wrong npm command in 6 of 9 cases (a global install under %APPDATA%\npm or ~\.npm-global run from home, and project installs run from a subfolder, from home, from the drive root or from another project), the fix ran the right one in 9 of 9; an npx cache run and the bundled runtime are detected the same by both. On main's code 14 of the 91 upgrade tests fail on assertions (12 new ones, and 2 existing ones that now also expect the project folder); all pass with the fix. Fixes #2477 Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>