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docs/BENCHMARK_EXPERIMENTS.md presented optional_graph_disabled as a current command even though new experiment plans emit only minimal_indexing. Document minimal_indexing as the active command and retain optional_graph_disabled solely as a historical-plan loader alias. Align README.md with the 16-tool classic contract asserted by tests/test_tool_consolidation.c, remove a stale source-line reference in tests/test_mcp.c, and use CBM_DEFAULT_AUTO_INDEX_LIMIT for CLI fallback assertions. Verification: CBM_ONLY_SUITE=cli make -f Makefile.cbm test (243 passed); CBM_ONLY_SUITE=mcp make -f Makefile.cbm test (273 passed); bash scripts/check-source-safety.sh. Signed-off-by: Andrew Hundt <ATHundt@gmail.com>