Commit Graph
40 Commits
Author SHA1 Message Date
Andrew Hundt cfdbe67c0d docs: update MCP surface wording
Replace stale 14-tool and incremental-refresh wording with the current streamlined-plus-classic tool model and configurable reindex policy.

Signed-off-by: Andrew Hundt <ATHundt@gmail.com>
2026-06-28 12:39:13 -04:00
Andrew Hundt 67bb858edd docs: clarify refresh policy claims
Update README, generated docs, and bundled skills so auto-index and watcher text no longer implies incremental refresh is the default path.

Keep the wording aligned with the current config-backed default: full atomic rebuild unless incremental_reindex is explicitly enabled for benchmarking or canary coverage.

Signed-off-by: Andrew Hundt <ATHundt@gmail.com>
2026-06-28 12:36:09 -04:00
Andrew Hundt 60cad1ebbb fix: consolidate trace API and rank persistence
Use trace_path as the single public call-tracing tool across classic and streamlined MCP surfaces, while exposing existing semantic_query and search_code mode parameters in the advertised schemas. Keep the streamlined surface compact, but ensure the hidden-tool reveal covers the full classic capability set without trace aliases.

Persist PageRank, LinkRank, and node_degree rows with direct VALUES inserts instead of per-row SELECT probes. The node/edge project is loaded once with the graph rows so full-scope dependency attribution stays identical to the previous behavior.

Add focused coverage for dependency project attribution, streamlined parameter contracts, and targeted suite allowlist entries so these checks cannot silently run zero tests.

Signed-off-by: Andrew Hundt <ATHundt@gmail.com>
2026-06-28 08:36:56 -04:00
Martin Vogel 53ebeb4cf1 docs(security): coordinated-disclosure process + realistic reporting policy
Add docs/SECURITY-DISCLOSURE.md describing how vulnerability reports are
handled end to end (private fix, cross-platform validation, reporter
verification, patched release, then a GitHub Security Advisory with a CVE
and credit).

Update SECURITY.md: add GitHub private vulnerability reporting as the
preferred channel, replace the over-tight 48h/7-day commitment with honest
best-effort targets for a solo-maintained project, add a safe-harbor
statement, and refresh the stale supported-versions table (0.5.x -> 0.8.x).

Signed-off-by: Martin Vogel <martin.vogel@datadice.io>
2026-06-22 09:19:51 +02:00
Martin Vogel 3ee9d5d112 Drop the nim grammar and refresh language counts
Removes the heaviest vendored grammar (66 MB) along with its language
wiring and test fixtures; the supported-language count moves to 158
across README, site, and manifest. The grammar manifest additionally
records the canonical-source decisions for the five
registry-disagreement grammars and the per-directory license files
restored earlier this week.
2026-06-12 02:17:39 +02:00
Martin Vogel 20bf70e238 Reword Hybrid LSP description; correct grammar count to 159
Describe the Hybrid LSP layer as a lightweight C implementation
structurally inspired by and compatible with major language servers,
rather than a clean-room re-implementation of their algorithms, across
README, site, and llms.txt. Drop intelephense from the reference list.
2026-06-12 00:02:30 +02:00
Martin Vogel ad5d45ab3d Document the v0.8.0 hybrid LSP lineup across README and site
Java, Kotlin, and Rust join the Hybrid LSP sections: badge and intro counts go 6 -> 9 language families, the capability tables gain the three new resolver rows (README + docs/index.html), the clean-room reference list adds Eclipse JDT and rust-analyzer, llms.txt and the landing-page JSON-LD/FAQ are aligned, the stale test-count badge moves to 5,577, and the sitemap lastmod is refreshed.
2026-06-11 23:44:34 +02:00
DeusDataandDeusData bd6d617bcf ci: deploy Pages via Actions, scoped to docs changes (#425)
The legacy "Deploy from a branch" Pages build ran Jekyll on every push to
main and failed on the planning docs under /docs — Jekyll's Liquid parser
hit `Unknown tag 'data'` in EVALUATION_PLAN.md, so the website build went
red after nearly every commit.

/docs is a hand-written static site (index.html + robots/sitemap/llms.txt),
so it never needed Jekyll. Deploy it with a GitHub Actions workflow that
uploads /docs as-is and only triggers on docs/** changes, and add a
.nojekyll guard. Switch the Pages source to "GitHub Actions" for this to
take over from the legacy build.

Co-authored-by: DeusData <joerge@datadice.io>
2026-06-08 18:26:11 +02:00
Martin Vogel 16034f21a8 docs(eval-plan): ground D1-D5 in the literature and external QA benchmarks
Address peer-review feedback on question provenance/external validity.

- Anchor the five dimensions to Sillito, Murphy & De Volder's catalogue of
  questions programmers ask during software-evolution tasks (FSE'06/TSE'08),
  with LaToza & Myers (2010) and Ko et al. (ICSE'07) as support; add a
  D1-D5 -> Sillito-group mapping table
- Adopt published repo-level QA benchmarks for the major languages: reuse and
  compare against SWE-QA (primary), with CoReQA, CodeRepoQA and RepoQA as
  references; note snippet-level sets (CodeQA/CS1QA/CoSQA) as the contrast
  that motivates structural retrieval
- Policy: anchor to Sillito; reuse SWE-QA for major languages; generate the
  multilingual remainder from independent LSP/git ground truth, never from
  the model under test
2026-06-06 11:49:48 +02:00
Martin Vogel e46d512a77 docs: rework benchmark plan into 159-language evaluation spec
Rename TEST_PLAN.md to EVALUATION_PLAN.md and rebuild it as a peer-review
evaluation specification covering all 159 supported languages.

- Graph (MCP) vs Explorer (grep/glob/read) per language, 5 bespoke questions
  mapped to 5 universal dimensions (D1-D5) for cross-language aggregation
- Sequential, main-channel execution: one language at a time, Explorer the
  only subagent, per-language index lifecycle (cold index -> eval -> delete)
  to avoid concurrent-indexing memory blowups; index time is a key metric
- LLM-as-a-Judge grading (single disclosed model, blind A/B, median of passes)
- Per-language node-type and edge-type histograms with every one of the 32
  edge types listed, zeros kept (a zero is a real extraction-gap signal)
- Cross-repo intelligence + semantic/similarity deep-dive for the 9 LSP
  languages, with recall/precision ground truth
- Single result tree (eval-results/), retiring the versioned-dir scheme
- Master repo assignment for all 159 languages; per-language chapters in
  Appendix A
2026-06-06 11:49:48 +02:00
DeusData 4b466396aa Delete docs/BENCHMARK_PYTHON.md 2026-06-05 18:55:34 +02:00
Martin Vogel 0338685c06 Advertise semantic search and correct language count across docs
Surface previously undocumented capabilities on the site, README, and
package metadata: semantic vector search (bundled nomic-embed-code
embeddings, fully local), SEMANTICALLY_RELATED / SIMILAR_TO clone
detection, cross-repo intelligence, data-flow tracing, change-impact
analysis, and ADR management. Broaden the cross-service entry to cover
gRPC/GraphQL/tRPC and pub/sub channels. Add a "star on GitHub" nav CTA.

GEO/SEO: add a question-style semantic-search section, extend the
JSON-LD featureList and FAQPage, add semantic keywords, and refresh the
sitemap lastmod.

Correct the language count to 159 (was 155/158) everywhere while keeping
the 157 vendored-grammar figure, update the Linux-kernel index stats to
the measured 4.81M nodes / 7.72M edges, and make trace_path the canonical
tool name (trace_call_path noted as an alias).
2026-06-05 18:48:41 +02:00
Martin Vogel efec2ceffe docs: rebuild landing page, update facts and add GEO/SEO + live releases
- Update to current capabilities: 158 languages, 11 agents, 14 MCP tools,
  Hybrid LSP, infrastructure-as-code indexing, single static C binary
- Add dedicated Hybrid LSP section and per-language resolution table
- Remove the GitNexus comparison
- Restructure with answer-first, question-based headings for AI answer engines
- Add JSON-LD structured data (SoftwareApplication, Organization, WebSite,
  BreadcrumbList, FAQPage) with arXiv preprint citation
- Add a live GitHub releases widget (client-side, graceful fallback)
- Add prominent research-preprint callout under the hero
- Centered nav, "by DeusData" subtitle, inline SVG favicon
- Welcome AI crawlers in robots.txt, refresh sitemap, add llms.txt
- Fix broken benchmark link
2026-06-01 21:12:06 +02:00
DeusData 25ba4472d5 Delete docs/TS_LSP_INTEGRATION_PLAN.md 2026-05-30 23:14:46 +02:00
DeusData fd5cbedd1a Delete docs/PLAN_PHP_LSP_INTEGRATION.md 2026-05-30 23:14:26 +02:00
DeusData eea63b2f27 Delete docs/CROSS_FILE_ARCHITECTURE.md 2026-05-30 23:14:16 +02:00
DeusData 19be397b05 Delete docs/PHP_LSP_PRE_FLIGHT.md 2026-05-30 23:14:03 +02:00
Martin Vogel d1143fbdce feat(lsp): TypeScript / JavaScript / JSX / TSX hybrid LSP resolver
Adds clean-room ts_lsp resolver covering single- and cross-file type
resolution for TS, JS, JSX, TSX. Mirrors the structure and entry-point
pattern of the existing Go and C/C++ LSP hybrids (single-file
cbm_run_ts_lsp + batch cbm_run_ts_lsp_cross), with TS-specific surface:

- Hash-table indexed type registry (FNV-1a, lazy via cbm_registry_finalize)
- Partial structural relater for NAMED / BUILTIN / LITERAL / TUPLE /
  UNION / INTERSECTION / FUNC / TEMPLATE / TYPE_PARAM / ALIAS
- Conditional types T extends U ? X : Y with union distribution
- 'infer X' constraint solver, keyof / typeof / T[K] type-position parsing
- Flow-sensitive narrowing (instanceof / typeof / discriminated unions),
  optional chaining, non-null assertion
- TS utility-type passthrough (Partial, Pick, ReturnType, Awaited, etc.)
- Function overload resolution by argument types
- Async iterables + 'for await ... of'
- Curated DOM stdlib subset + comprehensive base stdlib
- Mode flags: js_mode (.js/.jsx with JSDoc inference), jsx_mode (JSX
  expressions), dts_mode (.d.ts ambient declarations, no resolved calls)

Touches existing files only with additive changes:
- type_rep.h/.c: new TS-specific CBMTypeKind values + constructors
- type_registry.h/.c: TS-specific fields, hash indexes, cbm_registry_finalize
- cbm.c: dispatch for JS/TS/TSX languages
- lsp_all.c, Makefile.cbm, tests/test_main.c: include + suite registration
- README.md: feature list mention

291 ts_lsp test cases. CBM_LSP_DISABLED=1 disables the resolver
(matches CBM_LSP_DEBUG / CBM_LSP_DISABLED knobs in go_lsp / c_lsp).
2026-05-10 14:44:50 +02:00
Martin Vogel e6f4aa74bd Merge origin/main into worktree-php-lsp-integration
Resolved 5 conflicts where the php-lsp branch and main both added LSP
infrastructure but with different APIs:

- Makefile.cbm: kept both TEST_PHP_LSP_SRCS and main's py_lsp/scope/
  type_rep/stack_overflow test source variables in ALL_TEST_SRCS.
- internal/cbm/cbm.c: kept both #include lsp/php_lsp.h and lsp/py_lsp.h;
  the per-language dispatch already supports stacking PHP after PYTHON.
- internal/cbm/lsp_all.c: kept both lsp/php_lsp.c + php_stdlib_data.c
  AND lsp/py_lsp.c + python_stdlib_data.c in the compilation unit.
- src/pipeline/pass_calls.c: took main's version entirely.
  find_lsp_resolution + resolve_single_call(ctx, call, lsp_calls, ...)
  is language-agnostic — it matches any CBMResolvedCall whose caller_qn
  hits the textual call's enclosing function and whose callee_qn
  short-name hits the textual callee. PHP LSP populates the same
  result->resolved_calls array via cbm_run_php_lsp, so the unified
  resolver handles PHP for free. Dropped the php-branch's
  qn_short_name + lsp_override_resolution helpers as superseded.
  Locked confidence floor at main's CBM_LSP_CONFIDENCE_FLOOR = 0.6f
  (was 0.5f on the php branch).
- tests/test_main.c: kept all suite externs and RUN_SUITE invocations
  for php_lsp + py_lsp/py_lsp_bench/py_lsp_stress/py_lsp_scale +
  scope + type_rep.

Auto-merged: src/pipeline/pass_parallel.c.

Brings in 52 commits from main since the branch was forked at c768b61
(#207 watcher follow-up): #208 through #281, dependabot bumps, Pine
Script, AUR docs, INHERITS edges, get_architecture wiring, codeql
revert, the entire python-lsp subsystem.

Suite: 3249 passed, 0 failed (was 2971 on main; +278 new tests from
php-lsp matches the branch's claimed test count).
2026-05-09 17:14:14 +02:00
Martin Vogel 50b218e5d5 docs(benchmark): final PHP-LSP numbers — 278 tests, ~10k LoC 2026-05-09 16:06:20 +02:00
Martin Vogel 65964b4267 docs(benchmark): refresh PHP numbers — 248 tests, 47k CALLS edges 2026-05-09 15:02:49 +02:00
Martin Vogel 7a77a178ec docs(py_lsp): final results — 43/43 stress patterns PASS, zero gaps
BENCHMARK_PYTHON.md updated through Round 10. The stress-test suite
went from 22 patterns (19 hard / 3 KNOWN GAP) to 43 patterns (all
hard-asserted PASS). Bench held at 100% (52/52) across the surface
expansion.

Patterns added in Round 10 cover the framework / real-world cases
that distinguish parity-with-LSP from passing-toy-fixtures:
SQLAlchemy 2.0 Mapped[T], Pydantic BaseModel, async with / async
for, Callable[..., R], next(iter), **kwargs annotation, dict-literal
dispatch tables, lambda call-site inference, recursive types,
classmethod-to-method chains, dataclass default_factory, nested
match patterns.

The original Phase 11 plan called this category "compiler-grade".
The actual line where compiler-rebuild starts is now narrower:
constraint solving for ParamSpec, code-flow narrowing across
basic blocks, custom metaclass __call__, and full descriptor
protocol. None of those are needed for what's resolved on the
bench fixture or the stress suite.
2026-05-09 14:16:53 +02:00
Martin Vogel 97764d48b4 docs(py_lsp): final results table through Round 9
Updates BENCHMARK_PYTHON.md to capture the full trajectory:
- Bench: 81% (65 LOC) -> 79% (136 LOC) -> 95% (136 LOC) -> 98%
  (178 LOC) -> 100% (178 LOC, 52/52)
- 22 stress-test patterns probed; 19 hard-asserted, 3 documented gaps
- Documented gaps: function-as-dict-value, match sequence pattern,
  lambda parameter inference

The hard-asserted patterns include the full LSP surface a user would
expect: NamedTuple, TypedDict, Protocol, ABC, with-as, except-as,
post-early-return narrowing, tuple unpacking, dict.items
comprehension, slice typing, decorator factories, property setters,
Self chains, diamond MRO, recursive types, closures, generator
delegation, async-gen for, long fluent chains.
2026-05-09 12:49:02 +02:00
Martin Vogel 3ec56b7bff docs(benchmark): refresh PHP-LSP numbers post-Phase-4t/v 2026-05-09 11:45:45 +02:00
Martin Vogel 0be2ac338c docs(py_lsp): final results table + stopping-point doc
BENCHMARK_PYTHON.md ends the parity push with the in-process bench
results table (81% -> 79% -> 95% across rounds), an explicit
stopping-point list of features that would require building a
constraint solver / code-flow engine / plugin system, and an
"achievable next steps" list for future iterations that stay below
the compiler-rebuild line.

The 81% -> 79% jump going from a 65-line fixture to 136 lines is
deliberate: the smaller fixture was biased toward the resolver's
strengths. The 79% -> 95% jump comes from instance-attribute typing
(Round 4) which closed the largest single gap on real-world code
shapes.

Total: 11 LSP commits on this branch (Phases 0-11 plus Rounds 1-4),
2892 / 0 passing, 95% resolution on the parity fixture.
2026-05-09 03:39:05 +02:00
Martin Vogel ee380eb551 docs(benchmark): record Phase-4 PHP-LSP outcome on laravel/framework
Edge counts (laravel/framework):
  - Total edges:  196,979 (baseline) -> 152,614 (-22%)
  - CALLS edges: ~83,000 (baseline) -> 50,150 (-40%)

The drop is from suppressing name-fallback misroutes when the receiver
is statically typed to a vendor class that isn't indexed. The Phase-4
capabilities (generic templates, narrowing, property tracking, full
parent-walk method dispatch, expanded stdlib) cover most of phpactor's
type-resolution surface for in-project receivers.

100 unit tests, all passing. Total project tests: 2913 / 0 failed.
2026-05-09 02:55:05 +02:00
Martin Vogel a8c9ace4a5 feat(py_lsp): Phase 11 benchmark methodology + integration bench
Final phase of Python LSP integration. Adds:

- docs/BENCHMARK_PYTHON.md — methodology document covering target
  metrics (per-file LSP overhead < 10 ms, resolution ratio ≥ 40% on
  application code, ≥ 70% with stdlib, < 5% spot-check false positive
  rate), the declared accepted-failure-class ceiling (metaclass
  __call__, __getattr__/__getattribute__, dynamic setattr, runtime
  importlib, monkey-patching, eval/exec, descriptors beyond the
  standard property/classmethod/staticmethod, dynamic type() classes),
  and instructions for running scripts/benchmark-index.sh against the
  largest Python repos in datadice (falkemedia: 232 files, api-hub:
  188 files).

- tests/test_py_lsp_bench.c — in-process benchmark wired into
  scripts/test.sh. Runs cbm_extract_file on a 65-line Python fixture
  covering imports, dataclasses, classmethods, single-inheritance with
  super(), typed parameters, attribute chains, and stdlib calls.
  Asserts soft floor (resolved >= calls/4) and hard time budget
  (< 50 ms under sanitizers). Initial run reports:

    bench: 65 lines, 16 calls, 13 resolved (81%), 2.45 ms

  81% beats the 40% application-code target and the 70%
  application-plus-stdlib target. 2.45 ms under ASan + UBSan is well
  inside the 10 ms (no-sanitizer) production budget.

This wraps the 11-phase plan documented in PYTHON_LSP_PLAN.md. Total
test count: 2874 / 0 (100% pass). Repository-level benchmarks via
scripts/benchmark-index.sh remain a manual operation against a fresh
production binary; methodology is now in place for when that runs.
2026-05-09 00:47:00 +02:00
Martin Vogel b8926fa52b docs(benchmark): record PHP-LSP attribution-correctness outcome
PHP score moves from 9/12 (75%) to 10/12 (83%); the two remaining
PARTIALs (Q6 search recall, Q8 trace tool disambiguation) are non-LSP
issues tracked separately per PHP_LSP_PRE_FLIGHT.md §3 and §4.1.

Headline change is a graph-correctness win on laravel/framework: the
collide-set $prompt->value() misroute is gone, and unindexed-vendor
receiver calls no longer produce wrong name-fallback edges (total
edges drop ~14% from 196,979 to 169,268, trading recall for precision).
2026-05-08 23:33:26 +02:00
Martin Vogel b24f34aaa0 docs(php-lsp): plan PHP Light Semantic Pass and pre-flight findings
Pre-flight against laravel/framework establishes that the PHP graph has
systemic call-attribution drift on short names shared between a global
function and a method (e.g. value(), make(), get()). Spot-check shows
~20-30% of typed-receiver method calls misroute to the global helper
because the existing extractor cannot resolve receiver type.

Plan adds internal/cbm/lsp/php_lsp.{c,h} as a third sibling to go_lsp.c
and c_lsp.c. In-process C type resolver, no PHP runtime, no new
dependencies. Uses already-vendored tree-sitter-php grammar and the
existing CBMArena / CBMScope / CBMType / CBMTypeRegistry primitives.

Phase 1 success metric is collide-set attribution correctness, not
benchmark tier alone. Q6 (text search) and Q8 (trace tool
disambiguation) tracked as separate tickets.
2026-05-08 22:17:25 +02:00
Martin Vogel babbebc022 Move TEST_PLAN.md to docs/ 2026-03-26 15:14:57 +01:00
Martin Vogel f52376b982 Update: 2586 tests, 66 languages everywhere, tre vendored hash 2026-03-26 11:53:35 +01:00
Martin Vogel c38853f999 Remove Go-era cruft, update THIRD_PARTY.md for pure C project
- Delete cmd/codebase-memory-mcp/assets/ — skills and codex instructions
  are embedded as C string literals in src/cli/cli.c since v0.5.0
- Move BENCHMARK.md to docs/ to reduce root clutter
- Fix setup scripts: replace stale go build with scripts/build.sh
- THIRD_PARTY.md: replace Go module dependencies with vendored C
  libraries (sqlite3, mimalloc, mongoose, yyjson, xxhash, tre),
  fix CGo reference to static compilation
2026-03-22 01:09:12 +01:00
Martin Vogel f6b9b39c60 Fix snippet tests: align with simplified get_code_snippet handler
The snippet handler now uses exact QN + suffix matching only (no fuzzy/auto-resolve).
Updated 3 tests to match: fuzzy_suggestions, fuzzy_last_segment, auto_resolve_enabled.
2026-03-20 13:45:17 +01:00
Martin Vogel 78e1df2021 Refine messaging: seconds for avg repos, clarify AST (64 langs) vs LSP hybrid (Go/C/C++) 2026-03-19 23:44:35 +01:00
Martin Vogel d1ad61fec3 Update README + website: performance-first messaging, graph UI, 8 agents
- Lead with speed (3-min Linux kernel) and plug-and-play static binaries
- Highlight tree-sitter + LSP hybrid quality (Go, C, C++)
- Add graph UI screenshot to README and website hero
- Update agent list to 8 (add Antigravity, KiloCode, Aider)
- Remove all stale Go build references (go build, CGO_ENABLED, golangci-lint)
- Update architecture section to reflect C source layout
- Update comparison table: Visual web UI now Yes
- Fix stats: 14 tools, 64 languages, 8 agents
- Condense feature list and usage examples
2026-03-19 23:35:30 +01:00
Martin Vogel 3ff579c670 Update language count to 64, add Wolfram to language lists 2026-03-07 18:27:31 +01:00
Martin Vogel ced21194ac Fix Magma import/call extraction, resolve file-path imports in linker
- Add field('path', ...) to Magma load_statement grammar rule so
  parse_generic_imports() finds the import path via field lookup
  instead of the broken text fallback (which only extracted 1 per file)
- Fix passImports() to resolve file-path imports (e.g. "utils.mag",
  "lib/helpers.h") via fqn.ModuleQN() when raw path doesn't match
  any node QN — general fix benefiting any file-path-based import
- Add TestMagmaImport_Regression and TestMagmaCall_Regression
- Update language count 59 → 63 in README, docs/index.html, marketing
2026-03-07 12:55:56 +01:00
Martin Vogel fe20c998f2 Update landing page and README with latest stats
- Languages: 35 -> 59
- Add Gemini CLI, VS Code, Zed to supported clients list
- Update benchmark description to match v7 methodology
- Update meta tags and comparison table
2026-03-06 20:03:00 +01:00
Martin Vogel 8397e4d00f Add robots.txt and sitemap.xml for search engine indexing 2026-03-02 23:15:48 +01:00
Martin Vogel 9e50803ca1 Add CONTRIBUTING.md and GitHub Pages landing page
- CONTRIBUTING.md: build from source, run tests, PR guidelines, language fix workflow
- docs/index.html: SEO-optimized landing page with benchmark data, feature grid, comparison table
2026-03-02 23:13:24 +01:00