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* fix(skills): use skill references in skills-only delivery mode When delivery is configured as 'skills', generated SKILL.md files contained hardcoded /opsx:* command references pointing to commands that were never generated, breaking cross-skill workflows. Add transformToSkillReferences() with the explicit command-to-skill mapping (kept in sync with WORKFLOW_TO_SKILL_DIR) and wire it in init and update wherever skill content is generated, following the approach outlined in #881. Closes #881 Closes #879 Generated with Claude (Cowork) using claude-fable-5; verified with the full vitest suite (1683 tests passing). * fix(skills): wire skill references in workspace skill generation Review follow-up for the skills-only delivery fix: workspace skill setup (src/core/workspace/skills.ts) generates SKILL.md via the same generateSkillContent path but was not wired with transformToSkillReferences, leaving dangling /opsx:* references when delivery is 'skills'. Wire both call sites, add a regression test (verified to fail against the unwired code), strengthen the update skills-only test with content assertions, and correct the COMMAND_TO_SKILL_REFERENCE comment (WORKFLOW_TO_SKILL_DIR exists in both profile-sync-drift.ts and init.ts). Generated with Claude (Cowork) using claude-fable-5; verified with eslint and targeted vitest suites (144 tests passing). * refactor(skills): extract transformer selection into getTransformerForTool Address CodeRabbit review: the tool/delivery transformer selection was duplicated at five call sites across init.ts, update.ts, and workspace/skills.ts. Extract it into a documented helper in command-references.ts with unit tests locking the selection matrix (opencode/pi precedence, skills-only delivery, default). Generated with Claude (Cowork) using claude-fable-5; verified with eslint, tsc, and targeted vitest suites (147 tests passing). * fix(skills): prioritize skill references over hyphen commands in skills-only delivery Address review: getTransformerForTool returned transformToHyphenCommands for opencode/pi before checking delivery, so skills-only delivery still emitted /opsx-* references to commands that were never generated. Check delivery === 'skills' first so skill references win for every tool, and keep the hyphen transform for opencode/pi only when commands are generated. Add unit coverage for the opencode/pi selection matrix and an opencode skills-only init integration test asserting no /opsx: or /opsx- references remain. Generated with Claude (Cowork) using claude-fable-5; verified with eslint, tsc, and targeted vitest suites (148 tests passing). * docs(skills): add docstrings to init/update generation entry points * test(skills): reject stale hyphenated references in skills-only assertions * fix(skills): add missing update entry to command-to-skill reference map COMMAND_TO_SKILL_REFERENCE was missing the update workflow, so a /opsx:update reference in any skill template would survive skills-only transformation untouched. Align the map with the canonical 12-entry WORKFLOW_TO_SKILL_DIR and assert the generated openspec-update-change skill carries no raw command references.